Developing a metagenomic view of xenobiotic metabolism.

TitleDeveloping a metagenomic view of xenobiotic metabolism.
Publication TypeJournal Article
Year of Publication2013
AuthorsHaiser, HJ, Turnbaugh, PJ
JournalPharmacol Res
Volume69
Issue1
Pagination21-31
Date Published2013 Mar
ISSN1096-1186
KeywordsAnimals, Biotransformation, Gastrointestinal Tract, Humans, Metagenome, Metagenomics, Xenobiotics
Abstract

The microbes residing in and on the human body influence human physiology in many ways, particularly through their impact on the metabolism of xenobiotic compounds, including therapeutic drugs, antibiotics, and diet-derived bioactive compounds. Despite the importance of these interactions and the many possibilities for intervention, microbial xenobiotic metabolism remains a largely underexplored component of pharmacology. Here, we discuss the emerging evidence for both direct and indirect effects of the human gut microbiota on xenobiotic metabolism, and the initial links that have been made between specific compounds, diverse members of this complex community, and the microbial genes responsible. Furthermore, we highlight the many parallels to the now well-established field of environmental bioremediation, and the vast potential to leverage emerging metagenomic tools to shed new light on these important microbial biotransformations.

DOI10.1016/j.phrs.2012.07.009
Alternate JournalPharmacol. Res.
PubMed ID22902524
PubMed Central IDPMC3526672
Grant List2P30DK034854-26 / DK / NIDDK NIH HHS / United States
P50 GM068763 / GM / NIGMS NIH HHS / United States
P50 GM068763 / GM / NIGMS NIH HHS / United States