Papers

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2018
P. Spanogiannopoulos and Turnbaugh, P. J., Broad collateral damage of drugs against the gut microbiome., Nat Rev Gastroenterol Hepatol, 2018.
E. K. Mallory, Acharya, A., Rensi, S. E., Turnbaugh, P. J., Bright, R. A., and Altman, R. B., Chemical reaction vector embeddings: towards predicting drug metabolism in the human gut microbiome., Pac Symp Biocomput, vol. 23, pp. 56-67, 2018.
G. Fuks, Elgart, M., Amir, A., Zeisel, A., Turnbaugh, P. J., Soen, Y., and Shental, N., Combining 16S rRNA gene variable regions enables high-resolution microbial community profiling., Microbiome, vol. 6, no. 1, p. 17, 2018.
N. Koppel, Bisanz, J. E., Pandelia, M. - E., Turnbaugh, P. J., and Balskus, E. P., Discovery and characterization of a prevalent human gut bacterial enzyme sufficient for the inactivation of a family of plant toxins., Elife, vol. 7, 2018.
L. Zhang, Carmody, R. N., Kalariya, H. M., Duran, R. M., Moskal, K., Poulev, A., Kuhn, P., Tveter, K. M., Turnbaugh, P. J., Raskin, I., and Roopchand, D. E., Grape proanthocyanidin-induced intestinal bloom of Akkermansia muciniphila is dependent on its baseline abundance and precedes activation of host genes related to metabolic health., J Nutr Biochem, vol. 56, pp. 142-151, 2018.
P. J. Turnbaugh, Making Millennial Medicine More Meta., mSystems, vol. 3, no. 2, 2018.
C. Schneider, O'Leary, C. E., von Moltke, J., Liang, H. - E., Ang, Q. Yan, Turnbaugh, P. J., Radhakrishnan, S., Pellizzon, M., Ma, A., and Locksley, R. M., A Metabolite-Triggered Tuft Cell-ILC2 Circuit Drives Small Intestinal Remodeling., Cell, 2018.
2015
A. Martínez- del Campo, Bodea, S., Hamer, H. A., Marks, J. A., Haiser, H. J., Turnbaugh, P. J., and Balskus, E. P., Characterization and detection of a widely distributed gene cluster that predicts anaerobic choline utilization by human gut bacteria., MBio, vol. 6, no. 2, 2015.
R. N. Carmody, Gerber, G. K., Luevano, J. M., Gatti, D. M., Somes, L., Svenson, K. L., and Turnbaugh, P. J., Diet dominates host genotype in shaping the murine gut microbiota., Cell Host Microbe, vol. 17, no. 1, pp. 72-84, 2015.
D. E. Roopchand, Carmody, R. N., Kuhn, P., Moskal, K., Rojas-Silva, P., Turnbaugh, P. J., and Raskin, I., Dietary Polyphenols Promote Growth of the Gut Bacterium Akkermansia muciniphila and Attenuate High-Fat Diet-Induced Metabolic Syndrome., Diabetes, vol. 64, no. 8, pp. 2847-58, 2015.
G. G. Perron, Whyte, L., Turnbaugh, P. J., Goordial, J., Hanage, W. P., Dantas, G., and Desai, M. M., Functional characterization of bacteria isolated from ancient arctic soil exposes diverse resistance mechanisms to modern antibiotics., PLoS One, vol. 10, no. 3, p. e0069533, 2015.
L. A. David, Weil, A., Ryan, E. T., Calderwood, S. B., Harris, J. B., Chowdhury, F., Begum, Y., Qadri, F., LaRocque, R. C., and Turnbaugh, P. J., Gut microbial succession follows acute secretory diarrhea in humans., MBio, vol. 6, no. 3, pp. e00381-15, 2015.
C. F. Maurice, Knowles, S. C. L., Ladau, J., Pollard, K. S., Fenton, A., Pedersen, A. B., and Turnbaugh, P. J., Marked seasonal variation in the wild mouse gut microbiota., ISME J, vol. 9, no. 11, pp. 2423-34, 2015.
R. Jumpertz von Schwartzenberg and Turnbaugh, P. J., Siri, What Should I Eat?, Cell, vol. 163, no. 5, pp. 1051-2, 2015.

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